STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09255.1Phenylacetate--CoA ligase; KEGG: mmg:MTBMA_c04250 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase. (432 aa)    
Predicted Functional Partners:
ADZ09639.1
KEGG: mba:Mbar_A1645 phenylacetic acid degradation protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
 
 0.948
ADZ09111.1
KEGG: mev:Metev_2283 capsular polysaccharide biosynthesis protein.
  
  
 
0.926
ADZ08920.1
Phenylacetate--CoA ligase; KEGG: mth:MTH161 coenzyme F390 synthetase III; PFAM: AMP-dependent synthetase/ligase.
  
  
 
0.901
ADZ08667.1
Lactaldehyde dehydrogenase; KEGG: msi:Msm_0467 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
ADZ09256.1
PFAM: Amino acid-binding ACT; KEGG: mth:MTH1854 hypothetical protein.
 
   0.772
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
     
 0.577
ADZ08919.1
PFAM: Amino acid-binding ACT; KEGG: mmg:MTBMA_c04240 hypothetical protein.
 
   0.507
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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