STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09273.1PFAM: 4-oxalocrotonate tautomerase; KEGG: aar:Acear_1896 4-oxalocrotonate tautomerase family enzyme. (60 aa)    
Predicted Functional Partners:
ADZ09856.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: kcr:Kcr_1335 4-oxalocrotonate tautomerase.
  
  
  0.912
ADZ09760.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: kcr:Kcr_1335 4-oxalocrotonate tautomerase.
     
  0.900
ADZ09272.1
Methyltransferase MtaA/CmuA family; KEGG: msi:Msm_0518 methylcobalamin:coenzyme M methyltransferase, MtaA; TIGRFAM: Methyltransferase MtaA/CmuA; PFAM: Uroporphyrinogen decarboxylase (URO-D).
 
     0.610
ADZ09339.1
KEGG: mru:mru_1269 molybdenum-pterin binding protein Mop1; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1.
  
    0.563
ADZ09274.1
PFAM: Heat shock protein Hsp20; KEGG: mmg:MTBMA_c12560 small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
       0.513
ADZ10713.1
KEGG: msi:Msm_0131 molybdenum-binding protein, MopI; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1.
   
    0.502
ADZ10379.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: mac:MA2582 hypothetical protein.
  
     0.428
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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