STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09489.1KEGG: mmg:MTBMA_c15550 DNA-binding protein. (100 aa)    
Predicted Functional Partners:
ADZ09488.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mth:MTH1177 hypothetical protein.
  
  
 0.771
ADZ08641.1
PFAM: Uncharacterised protein family, nitrogen regulatory protein PII-related; KEGG: mmg:MTBMA_c14940 transcriptional regulatory protein.
  
    0.701
ADZ08760.1
TIGRFAM: Methyl coenzyme M reductase system, component A2; PFAM: ABC transporter-like; KEGG: mmg:MTBMA_c13970 methyl-coenzyme M reductase, component A2; SMART: ATPase, AAA+ type, core.
  
    0.588
ADZ10652.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Methyl coenzyme M reductase system, component A2; KEGG: mmg:MTBMA_c13970 methyl-coenzyme M reductase, component A2; PFAM: ABC transporter-like.
  
    0.588
ADZ09487.1
KEGG: mfv:Mfer_0791 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; Dinitrogenase iron-molybdenum cofactor biosynthesis.
       0.554
ADZ09486.1
PFAM: Uncharacterised conserved protein UCP004962; KEGG: mpi:Mpet_0597 hypothetical protein.
       0.475
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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