STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09490.1Alkylhydroperoxidase like protein, AhpD family; KEGG: mtp:Mthe_0782 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase. (99 aa)    
Predicted Functional Partners:
ADZ09492.1
Heterodisulfide reductase subunit C, HdrC2; KEGG: mst:Msp_0125 HdrC2.
  
    0.615
ADZ08750.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal; NADP oxidoreductase, coenzyme F420-dependent; KEGG: mmg:MTBMA_c03230 dehydrogenase.
  
  
 0.574
ADZ09491.1
KEGG: msi:Msm_0083 heterodisulfide reductase, subunit B, HdrB; PFAM: Cysteine-rich domain.
  
    0.569
ADZ09182.1
Desulfoferrodoxin; KEGG: mmg:MTBMA_c11510 superoxide reductase; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding domain; PFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx.
  
  
 0.509
ADZ09879.1
PFAM: Conserved hypothetical protein, MTH865; KEGG: mae:Maeo_0093 MTH865-like family protein.
  
    0.437
ADZ09248.1
Ferroxidase; KEGG: mmg:MTBMA_c06090 ferritin; PFAM: Ferritin/Dps protein.
  
    0.416
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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