STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09494.1KEGG: mmq:MmarC5_1147 hypothetical protein. (352 aa)    
Predicted Functional Partners:
ADZ09687.1
PFAM: Domain of unknown function DUF362; KEGG: mbn:Mboo_0429 hypothetical protein.
 
     0.583
ADZ09911.1
PFAM: 4Fe-4S binding domain; KEGG: mma:MM_3293 iron-sulfur cluster-binding protein.
  
     0.530
ADZ10099.1
KEGG: mhu:Mhun_0199 4Fe-4S ferredoxin, iron-sulfur binding.
  
     0.502
ADZ09422.1
KEGG: mvn:Mevan_0177 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase.
       0.442
ADZ10084.1
PFAM: 4Fe-4S binding domain; KEGG: mth:MTH221 hypothetical protein.
  
     0.438
ADZ09493.1
PFAM: Major facilitator superfamily MFS-1; KEGG: msi:Msm_1210 efflux pump antibiotic resistance protein.
       0.431
ADZ10226.1
PFAM: Nitroreductase-like; KEGG: mac:MA3208 hypothetical protein.
 
  
 0.402
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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