STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09521.1PFAM: Protein of unknown function DUF2104, membrane; KEGG: mru:mru_1401 energy-converting hydrogenase A subunit L EhaL. (107 aa)    
Predicted Functional Partners:
ADZ09517.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c07990 energy-converting hydrogenase A, subunit P.
  
    0.907
ADZ09520.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, EhaM; KEGG: mth:MTH396 hypothetical protein.
  
    0.898
ADZ09519.1
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: mmg:MTBMA_c07970 energy-converting hydrogenase A, subunit N.
  
    0.892
ADZ09518.1
NADH dehydrogenase (quinone); KEGG: mmg:MTBMA_c07980 energy-converting hydrogenase A, subunit O; PFAM: NADH-quinone oxidoreductase, subunit D; Nickel-dependent hydrogenase, large subunit.
       0.866
ADZ09516.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: mmg:MTBMA_c08000 energy-converting hydrogenase A, subunit Q; manually curated; PFAM: 4Fe-4S binding domain.
       0.778
ADZ09523.1
PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H; KEGG: mth:MTH393 NADH dehydrogenase (ubiquinone), subunit 1 related protein.
  
    0.764
ADZ09522.1
KEGG: mmg:MTBMA_c07940 energy-converting hydrogenase A, subunit K.
       0.724
ADZ09515.1
KEGG: msi:Msm_0309 hypothetical protein.
       0.682
ADZ09513.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mmg:MTBMA_c08030 energy-converting hydrogenase T, subunit T; Belongs to the carbohydrate kinase PfkB family.
       0.579
ADZ09514.1
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; KEGG: mfv:Mfer_1096 formylmethanofuran-tetrahydromethanopterin formyltransferase; PFAM: Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal; Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal.
       0.579
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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