STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09531.1KEGG: mmg:MTBMA_c07850 energy-converting hydrogenase A, subunit B. (167 aa)    
Predicted Functional Partners:
ADZ09528.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaE; KEGG: mth:MTH388 hypothetical protein.
  
    0.937
ADZ09527.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaF; KEGG: mmg:MTBMA_c07890 energy-converting hydrogenase A, subunit F.
  
    0.921
ADZ09532.1
KEGG: mth:MTH384 hypothetical protein.
  
  
 0.916
ADZ09530.1
PFAM: Protein of unknown function DUF2109, membrane; KEGG: mmg:MTBMA_c07860 energy-converting hydrogenase A, subunit C.
  
    0.861
ADZ09529.1
PFAM: Protein of unknown function DUF2108, membrane; KEGG: mth:MTH387 hypothetical protein.
  
    0.859
ADZ09526.1
PFAM: Protein of unknown function DUF2105, membrane; KEGG: mru:mru_1406 energy-converting hydrogenase A subunit G EhaG.
  
    0.771
ADZ09525.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaH, predicted; KEGG: mth:MTH391 NADH dehydrogenase I, subunit N related protein.
  
    0.770
ADZ08523.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c16280 energy-converting hydrogenase B, subunit L.
      
 0.669
ADZ10724.1
Molybdopterin dinucleotide-binding region; PFAM: Molydopterin dinucleotide-binding domain; KEGG: msi:Msm_1411 tungsten formylmethanofuran dehydrogenase, subunit D, FwdD.
     
 0.661
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.655
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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