STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09549.1KEGG: mfv:Mfer_1074 glycosyl transferase family 2. (249 aa)    
Predicted Functional Partners:
ADZ09548.1
PFAM: Glycosyl transferase, group 1; KEGG: mst:Msp_0044 glycosyltransferase.
 
     0.809
ADZ09546.1
PFAM: Glycosyl transferase, family 2; KEGG: mfv:Mfer_1072 glycosyl transferase family 2.
 
     0.712
ADZ09547.1
Hypothetical protein.
       0.655
ADZ09550.1
PFAM: Glycosyl transferase, family 2; KEGG: mst:Msp_0045 glycosyltransferase.
 
     0.595
ADZ10048.1
PFAM: Peptidase C60, sortase A/B; KEGG: mmg:MTBMA_c03990 sortase related protein.
 
     0.486
ADZ08894.1
PFAM: Peptidase C60, sortase A/B; KEGG: mth:MTH1829 hypothetical protein.
 
     0.414
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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