STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09552.1KEGG: mpd:MCP_1700 putative PadR-like family transcriptional regulator; manually curated; PFAM: Transcription regulator PadR N-terminal-like. (119 aa)    
Predicted Functional Partners:
ADZ09553.1
KEGG: mpd:MCP_1699 hypothetical protein.
     
 0.794
ADZ09498.1
PFAM: Protein of unknown function DUF1700; KEGG: btl:BALH_3109 hypothetical protein.
 
  
 0.620
ADZ09554.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: msi:Msm_1483 multidrug ABC transporter, ATPase component; SMART: ATPase, AAA+ type, core.
  
  
 0.603
ADZ09555.1
PFAM: ABC-2 type transporter; KEGG: msi:Msm_1484 multidrug ABC transporter, permease component.
     
 0.508
ADZ09551.1
PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: mst:Msp_1035 hypothetical protein.
       0.478
ADZ08312.1
Transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; KEGG: mmg:MTBMA_c00710 transcriptional regulator.
  
     0.477
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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