STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09578.1KEGG: mth:MTH593 hypothetical protein. (234 aa)    
Predicted Functional Partners:
ADZ09577.1
TIGRFAM: Small GTP-binding protein; PFAM: Mitochondrial Rho-like; KEGG: mth:MTH594 hypothetical protein; SMART: Ras small GTPase, Rab type.
 
     0.852
ADZ09576.1
Roadblock/LC7 family protein; KEGG: mth:MTH595 hypothetical protein; PFAM: Dynein light chain-related; SMART: Dynein light chain-related.
 
     0.819
ADZ09580.1
KEGG: mmg:MTBMA_c09710 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
 
     0.718
ADZ09389.1
PFAM: Circadian clock protein KaiC/DNA repair protein RadA; KEGG: mmg:MTBMA_c00830 hypothetical protein.
  
     0.622
ADZ09579.1
KEGG: mth:MTH593 hypothetical protein.
 
    
0.534
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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