STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09592.1Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: Signal transduction response regulator, receiver domain; PAS fold; KEGG: mth:MTH457 sensory transduction regulatory protein; SMART: Signal transduction response regulator, receiver domain; PAS. (256 aa)    
Predicted Functional Partners:
ADZ10116.1
TIGRFAM: PAS; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; PAS fold-3; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; KEGG: mth:MTH902 sensory transduction histidine kinase; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain.
 
 
 0.895
ADZ08998.1
KEGG: mth:MTH447 sensory transduction regulatory protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
 
 
0.862
ADZ09344.1
KEGG: mmg:MTBMA_c08430 sensory transduction regulatory protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
 
 
0.860
ADZ10090.1
Response regulator receiver protein; KEGG: mma:MM_2516 putative transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
 
 
0.860
ADZ09591.1
Putative PAS/PAC sensor protein; KEGG: pca:Pcar_2709 two component signal transduction response regulator; PFAM: Signal transduction response regulator, receiver domain; PAS fold-3; SMART: Signal transduction response regulator, receiver domain.
 
 
 
0.856
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.765
ADZ09594.1
Response regulator receiver; KEGG: mba:Mbar_A3448 putative transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
 
 
 
0.753
ADZ10115.1
KEGG: mmg:MTBMA_c12950 sensory transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; PAS fold; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain.
 
 
 
0.750
ADZ08317.1
KEGG: mth:MTH440 sensory transduction regulatory protein; PFAM: Signal transduction response regulator, receiver domain; PAS fold; SMART: Signal transduction response regulator, receiver domain; PAS.
 
 
 
0.744
ADZ08318.1
KEGG: rci:RCIX2113 putative signal transduction protein; PFAM: Signal transduction response regulator, receiver domain; PAS fold; SMART: Signal transduction response regulator, receiver domain.
 
 
 
0.740
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.