STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09639.1KEGG: mba:Mbar_A1645 phenylacetic acid degradation protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily. (136 aa)    
Predicted Functional Partners:
ADZ08920.1
Phenylacetate--CoA ligase; KEGG: mth:MTH161 coenzyme F390 synthetase III; PFAM: AMP-dependent synthetase/ligase.
 
 
 0.948
ADZ09255.1
Phenylacetate--CoA ligase; KEGG: mmg:MTBMA_c04250 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase.
 
 
 0.948
ADZ09111.1
KEGG: mev:Metev_2283 capsular polysaccharide biosynthesis protein.
  
 
 0.927
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.584
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.570
ADZ08265.1
KEGG: mmg:MTBMA_c01110 coenzyme F390 synthetase; TIGRFAM: Coenzyme F390 synthetase; PFAM: AMP-dependent synthetase/ligase.
 
  
 0.496
ADZ09638.1
KEGG: mpd:MCP_2118 hypothetical protein.
       0.483
ADZ10508.1
KEGG: mth:MTH1588 ferripyochelin binding protein.
 
  
 0.482
ADZ10325.1
PFAM: Thioesterase superfamily; KEGG: mmg:MTBMA_c10390 thioesterase.
 
   
 0.466
ADZ09617.1
Propanoyl-CoA C-acyltransferase; KEGG: mmg:MTBMA_c11890 acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal.
  
  
 0.440
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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