STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09718.1KEGG: hbo:Hbor_10700 transcriptional regulator, ArsR family. (95 aa)    
Predicted Functional Partners:
ADZ09719.1
Hypothetical protein.
       0.773
ADZ08523.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c16280 energy-converting hydrogenase B, subunit L.
 
   
 0.489
ADZ08387.1
Type III restriction protein res subunit; KEGG: mmg:MTBMA_c17370 ATP-dependent helicase; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal.
 
  
 0.439
ADZ09608.1
Protein of unknown function UPF0058; PFAM: Uncharacterised protein family UPF0058; KEGG: mmg:MTBMA_c06730 hypothetical protein.
 
   
 0.437
ADZ09239.1
PFAM: Cytidylyltransferase; TIGRFAM: Nicotinamide-nucleotide adenylyltransferase, archaeal type; Cytidyltransferase-related; HAMAP: Nicotinamide-nucleotide adenylyltransferase, archaeal type; KEGG: mmg:MTBMA_c06000 nicotinamide-nucleotide adenylyltransferase.
 
    0.425
ADZ09408.1
PFAM: Protein of unknown function DUF137; KEGG: mmg:MTBMA_c08300 hypothetical protein.
 
     0.422
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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