STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09745.1PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: nmg:Nmag_4101 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif. (800 aa)    
Predicted Functional Partners:
ADZ09478.1
KEGG: mac:MA1268 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
     0.751
ADZ09346.1
KEGG: mmg:MTBMA_c08410 sensory transduction regulatory protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
 
     0.727
ADZ09479.1
Putative PAS/PAC sensor protein; TIGRFAM: PAS; PFAM: PAS fold; Signal transduction response regulator, receiver domain; KEGG: bph:Bphy_1145 multi-sensor signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver domain; PAS; PAC motif.
     0.704
ADZ09861.1
Hypothetical protein; KEGG: mac:MA1269 response regulator receiver.
 
     0.694
ADZ09291.1
Response regulator receiver protein; KEGG: nhl:Nhal_1443 PAS sensor protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain.
     0.639
ADZ09746.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mmg:MTBMA_c10830 ABC-type transport system, permease protein.
       0.477
ADZ09747.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mru:mru_1438 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.477
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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