STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09783.1KEGG: mbu:Mbur_2163 hypothetical protein. (1059 aa)    
Predicted Functional Partners:
ADZ09784.1
KEGG: mbu:Mbur_2162 helicase-like protein; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal.
 
     0.990
ADZ09893.1
PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: mth:MTH912 hypothetical protein.
 
     0.933
ADZ09358.1
PFAM: DNA methylase, adenine-specific; KEGG: mmq:MmarC5_1169 N-6 DNA methylase.
 
  
 0.874
ADZ08991.1
PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: mmg:MTBMA_c04780 hypothetical protein.
  
  
 0.843
rnj
Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily.
       0.800
ADZ09359.1
PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mmw:Mmwyl1_3199 restriction modification system DNA specificity subunit.
 
  
 0.760
ADZ08706.1
Beta-lactamase domain protein; KEGG: mmg:MTBMA_c14810 hydrolase; PFAM: Beta-lactamase-like; Rhodanese-like; SMART: Beta-lactamase-like; Rhodanese-like.
 
     0.750
ADZ09297.1
KEGG: mpl:Mpal_2117 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
       0.718
ADZ08758.1
PFAM: Radical SAM; KEGG: kcr:Kcr_0677 radical SAM domain-containing protein.
       0.692
ADZ09362.1
Putative transcriptional regulator; PFAM: ATPase, AAA-4; KEGG: mac:MA2370 ATP-dependent DNA helicase.
 
    0.685
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.