STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09786.1KEGG: mru:mru_0062 hypothetical protein. (1169 aa)    
Predicted Functional Partners:
ADZ09787.1
PFAM: Domain of unknown function DUF2357; Protein of unknown function DUF524; KEGG: mru:mru_0063 hypothetical protein.
 
     0.957
ADZ09682.1
GAF domain protein; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF.
  
     0.550
ADZ09785.1
KEGG: mth:MTH1638 hypothetical protein.
       0.549
ADZ09828.1
KEGG: mth:MTH570 hypothetical protein.
  
     0.501
ADZ09788.1
PFAM: DNA helicase, UvrD/REP type; KEGG: mru:mru_1111 ATP-dependent DNA helicase UvrD/REP family.
       0.483
ADZ09789.1
KEGG: msi:Msm_0114 hypothetical protein.
       0.474
ADZ09629.1
KEGG: mmg:MTBMA_c08760 hypothetical protein.
  
     0.448
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
  
     0.443
ADZ09790.1
KEGG: ptm:GSPATT00039790001 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Uncharacterised protein family UPF0286; SMART: Tetratricopeptide repeat.
 
     0.414
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.