STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09832.1KEGG: mth:MTH359 hypothetical protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like. (197 aa)    
Predicted Functional Partners:
ADZ10278.1
KEGG: mfv:Mfer_0066 cell wall biosynthesis protein.
  
     0.576
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.573
ADZ10382.1
PFAM: RDD; KEGG: mfv:Mfer_1285 rdd domain containing protein.
 
    0.544
ADZ10637.1
Sortase family protein; KEGG: mth:MTH1030 hypothetical protein; TIGRFAM: Peptidase C60, sortase A/B; PFAM: Peptidase C60, sortase A/B.
  
     0.535
ADZ08727.1
PFAM: PhoU; KEGG: mmg:MTBMA_c03000 phosphate transport system regulator.
 
     0.515
ADZ08904.1
PFAM: Protein of unknown function DUF1611; KEGG: mmg:MTBMA_c04070 hypothetical protein.
 
     0.477
ADZ09833.1
PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: mru:mru_0221 Fic family protein.
       0.461
ADZ10427.1
PFAM: ATP-grasp fold, DUF201-type; KEGG: mst:Msp_1215 hypothetical protein.
 
   
 0.456
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.455
ADZ10727.1
PFAM: Helix-turn-helix type 3; 4Fe-4S binding domain; KEGG: mth:MTH1553 tungsten formylmethanofuran dehydrogenase, subunit H.
 
     0.455
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.