STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09889.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: mfv:Mfer_0486 metallophosphoesterase. (265 aa)    
Predicted Functional Partners:
ADZ09888.1
TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; KEGG: msi:Msm_1469 nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component, TauA.
 
   
 0.531
ADZ09887.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: msi:Msm_0291 nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC.
 
    0.524
tgtA
7-cyano-7-deazaguanine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
  
    0.518
cpgS
Cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP.
 
     0.480
ADZ09886.1
Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: mtp:Mthe_0218 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.418
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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