Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADZ09898.1PFAM: Transcription regulator PadR N-terminal-like; KEGG: rci:RCIX2313 PadR family transcriptional regulator. (168 aa)    
Predicted Functional Partners:
ADZ09897.1
Hypothetical protein.
       0.752
ADZ09895.1
Transcriptional regulator, MarR family; KEGG: mst:Msp_0512 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
 
  
 0.463
ADZ09834.1
Methyltransferase; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, putative; KEGG: mac:MA0170 hypothetical protein.
 
     0.450
ADZ09896.1
PFAM: Major facilitator superfamily MFS-1; KEGG: mac:MA0185 multidrug efflux protein.
       0.427
ADZ09899.1
KEGG: mma:MM_0501 3-demethylubiquinone-9 3-methyltransferase.
       0.416
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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