Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ09905.1Regulatory protein ArsR; SMART: HTH transcriptional regulator, ArsR; KEGG: mth:MTH864 hypothetical protein. (249 aa)    
Predicted Functional Partners:
ADZ09613.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mth:MTH1097 hypothetical protein.
 
   
 0.736
ADZ09879.1
PFAM: Conserved hypothetical protein, MTH865; KEGG: mae:Maeo_0093 MTH865-like family protein.
 
     0.722
ADZ08320.1
PFAM: Protein of unknown function DUF63; KEGG: mth:MTH1480 hypothetical protein.
  
     0.656
ADZ09904.1
PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mmg:MTBMA_c08080 FMN-binding protein.
 
     0.642
ADZ09666.1
PFAM: Protein of unknown function DUF2193; KEGG: mtp:Mthe_1137 hypothetical protein.
  
     0.581
ADZ10566.1
PFAM: Uncharacterised conserved protein UCP004962; KEGG: mth:MTH862 hypothetical protein.
 
     0.551
ADZ09534.1
PFAM: Domain of unknown function DUF1616; KEGG: mmg:MTBMA_c07810 hypothetical protein.
  
     0.544
ADZ08303.1
PFAM: Protein of unknown function DUF1624; KEGG: mev:Metev_1686 hypothetical protein.
 
     0.539
ADZ10243.1
PFAM: Radical SAM; KEGG: mac:MA3317 arylsulfatase regulator.
 
     0.527
ADZ09094.1
PFAM: Domain of unknown function DUF1616; KEGG: mev:Metev_2319 hypothetical protein.
  
     0.515
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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