STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09918.1KEGG: cbb:CLD_3584 hypothetical protein. (137 aa)    
Predicted Functional Partners:
ADZ08442.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: mma:MM_0143 4-carboxymuconolactone decarboxylase.
  
     0.558
ADZ09023.1
Hypothetical protein; KEGG: dae:Dtox_3122 tetratricopeptide TPR_2 repeat protein.
  
     0.513
ADZ10141.1
PFAM: 4Fe-4S binding domain; KEGG: cpy:Cphy_1389 hypothetical protein.
  
     0.464
ADZ08487.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cac:CA_C3374 acetyltransferase.
  
     0.452
ADZ09458.1
KEGG: tva:TVAG_021770 hypothetical protein.
  
     0.447
ADZ09257.1
KEGG: cce:Ccel_1422 antifreeze protein type I.
  
     0.446
ADZ10687.1
PKD domain containing protein; KEGG: mpl:Mpal_1810 carbohydrate binding family 6; PFAM: PKD domain; SMART: PKD/Chitinase domain.
  
     0.427
ADZ09080.1
KEGG: mpd:MCP_2892 hypothetical protein.
  
     0.426
ADZ09682.1
GAF domain protein; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF.
  
     0.426
ADZ09629.1
KEGG: mmg:MTBMA_c08760 hypothetical protein.
  
     0.410
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.