STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09926.1Transcriptional regulator NikR, CopG family; PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding; KEGG: mmg:MTBMA_c09830 nickel responsive regulator. (127 aa)    
Predicted Functional Partners:
ADZ09928.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: mev:Metev_2087 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
     
 0.522
ADZ09927.1
ABC-type metal ion transporter, periplasmic subunit; PFAM: ABC transporter metal-binding lipoprotein; KEGG: mfv:Mfer_0061 periplasmic solute binding protein.
     
 0.503
ADZ09929.1
ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: mth:MTH606 manganese transport system membrane protein.
     
 0.472
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.