STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ09936.1PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msi:Msm_0094 TetR family transcriptional regulator. (193 aa)    
Predicted Functional Partners:
ADZ09960.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: hor:Hore_13530 transcriptional regulator, TetR family.
  
     0.724
ADZ09935.1
YhgE/Pip N-terminal domain protein; KEGG: mmg:MTBMA_c04280 phage infection protein; TIGRFAM: Phage infection protein, YhgE, N-terminal; Phage infection protein, YhgE, C-terminal; PFAM: ABC-2 type transporter.
 
  
 0.711
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.698
ADZ09937.1
KEGG: rci:RCIX903 hypothetical protein.
       0.529
ADZ09938.1
KEGG: mth:MTH864 hypothetical protein.
  
  
 0.402
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.