STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10027.1APHP domain protein; PFAM: APHP; KEGG: mmg:MTBMA_c13780 hypothetical protein. (502 aa)    
Predicted Functional Partners:
ADZ08986.1
KEGG: mmg:MTBMA_c04730 hypothetical protein.
  
     0.732
ADZ10048.1
PFAM: Peptidase C60, sortase A/B; KEGG: mmg:MTBMA_c03990 sortase related protein.
  
     0.700
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
 
     0.667
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.654
ADZ10741.1
KEGG: mmg:MTBMA_c01260 hypothetical protein.
  
     0.654
ADZ08894.1
PFAM: Peptidase C60, sortase A/B; KEGG: mth:MTH1829 hypothetical protein.
  
     0.646
ADZ08584.1
KEGG: mth:MTH1192 hypothetical protein.
  
     0.633
ADZ08865.1
PFAM: Protein of unknown function DUF95, transmembrane; KEGG: mmg:MTBMA_c07020 hypothetical protein.
 
    0.627
ADZ09885.1
KEGG: mmg:MTBMA_c05440 hypothetical protein.
  
     0.626
ADZ08415.1
PFAM: Protein of unknown function DUF169; KEGG: mth:MTH469 hypothetical protein.
  
     0.612
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.