STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10028.1KEGG: mth:MTH359 hypothetical protein; PFAM: Transglutaminase-like; Pseudomurein-binding repeat; SMART: Transglutaminase-like. (419 aa)    
Predicted Functional Partners:
ADZ09210.1
KEGG: mmg:MTBMA_c06320 hypothetical protein.
  
     0.639
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.608
ADZ10637.1
Sortase family protein; KEGG: mth:MTH1030 hypothetical protein; TIGRFAM: Peptidase C60, sortase A/B; PFAM: Peptidase C60, sortase A/B.
  
     0.579
ADZ10278.1
KEGG: mfv:Mfer_0066 cell wall biosynthesis protein.
  
     0.572
ADZ08727.1
PFAM: PhoU; KEGG: mmg:MTBMA_c03000 phosphate transport system regulator.
 
     0.536
ADZ08904.1
PFAM: Protein of unknown function DUF1611; KEGG: mmg:MTBMA_c04070 hypothetical protein.
 
     0.510
ADZ10382.1
PFAM: RDD; KEGG: mfv:Mfer_1285 rdd domain containing protein.
 
    0.488
ADZ08501.1
KEGG: mmg:MTBMA_c12790 glycosyltransferase; TIGRFAM: Conserved hypothetical protein CHP00661; PFAM: Glycosyl transferase, family 2.
 
     0.479
ADZ08419.1
Replication factor-A domain protein; PFAM: Replication factor A, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmg:MTBMA_c17710 replication factor A.
 
     0.471
ADZ10736.1
PFAM: HTH transcriptional regulator, LysR; KEGG: mru:mru_0249 transcriptional regulator LysR family.
 
     0.468
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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