STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10036.1PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mba:Mbar_A1549 antibiotic resistance protein. (178 aa)    
Predicted Functional Partners:
ADZ10037.1
PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: ckr:CKR_0323 hypothetical protein.
 
     0.822
ADZ10039.1
TIGRFAM: Nitrogenase iron-iron, delta subunit; KEGG: ckr:CKR_0321 hypothetical protein; PFAM: Vanadium/alternative nitrogenase delta subunit.
 
     0.695
ADZ10038.1
PFAM: Nitrogenase/oxidoreductase, component 1; KEGG: cts:Ctha_1833 Fe-only nitrogenase subunit beta; Belongs to the NifD/NifK/NifE/NifN family.
 
     0.625
ADZ10040.1
TIGRFAM: Nitrogenase iron-iron protein, alpha chain; Nitrogenase alpha chain; Nitrogenase component 1, alpha chain; KEGG: cts:Ctha_1831 nitrogenase subunit alpha; PFAM: Nitrogenase/oxidoreductase, component 1.
 
     0.589
ADZ08468.1
TIGRFAM: Conserved hypothetical protein CHP00061; KEGG: mmg:MTBMA_c16880 hypothetical protein.
  
    0.552
ADZ10200.1
PFAM: 4Fe-4S binding domain; KEGG: bpo:BP951000_2164 4Fe-4S ferredoxin-domain-containing protein.
   
    0.524
ADZ10035.1
Hypothetical protein.
       0.461
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.