STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10183.1TIGRFAM: AMMECR1; HAMAP: AMMECR1-domain protein; KEGG: mru:mru_1728 AMMECR1 domain-containing protein; PFAM: AMMECR1. (191 aa)    
Predicted Functional Partners:
ADZ09068.1
UPF0103 protein; KEGG: mfv:Mfer_0894 hypothetical protein; HAMAP: Uncharacterised protein family UPF0103; PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo-related); Belongs to the MEMO1 family.
    0.988
ADZ08431.1
PFAM: Radical SAM; KEGG: mmg:MTBMA_c17810 glycyl radical-activating enzyme.
     0.930
ADZ10184.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: msi:Msm_0866 Zn metalloprotease, TldD.
       0.889
ADZ10182.1
Small GTP-binding protein; KEGG: mmg:MTBMA_c12550 GTPase; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related.
       0.775
ADZ10181.1
PFAM: Heat shock protein Hsp20; KEGG: mmg:MTBMA_c12560 small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
    0.553
ADZ09877.1
CoA-binding domain protein; KEGG: mbu:Mbur_1347 acyl-CoA synthetase; PFAM: CoA-binding; SMART: CoA-binding.
       0.440
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.