STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10220.1PFAM: UbiA prenyltransferase; KEGG: mem:Memar_2408 UbiA prenyltransferase. (307 aa)    
Predicted Functional Partners:
ADZ10221.1
PFAM: UbiA prenyltransferase; KEGG: mem:Memar_2408 UbiA prenyltransferase.
 
  
 
0.965
ADZ08878.1
TIGRFAM: Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type; KEGG: mfv:Mfer_0012 3-hydroxy-3-methylglutaryl-coenzyme a reductase; PFAM: Hydroxymethylglutaryl-CoA reductase, class I/II; Belongs to the HMG-CoA reductase family.
   
 
 0.783
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
    
 0.535
ADZ09682.1
GAF domain protein; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF.
  
     0.478
ADZ09629.1
KEGG: mmg:MTBMA_c08760 hypothetical protein.
  
     0.473
ADZ10536.1
PFAM: Nitrogen regulatory protein PII; KEGG: mmg:MTBMA_c11600 small GTPase.
  
     0.423
ADZ10689.1
KEGG: mla:Mlab_0256 periplasmic binding protein.
 
     0.420
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
 
     0.419
ADZ10683.1
KEGG: mpd:MCP_0447 hypothetical protein.
 
     0.413
ADZ10222.1
PFAM: Protein of unknown function DUF998; KEGG: mpl:Mpal_2455 protein of unknown function DUF998.
       0.407
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.