STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10227.1UPF0597 protein yhaM; HAMAP: Uncharacterised protein family UPF0597; KEGG: ckr:CKR_0543 hypothetical protein; Belongs to the UPF0597 family. (436 aa)    
Predicted Functional Partners:
ADZ10226.1
PFAM: Nitroreductase-like; KEGG: mac:MA3208 hypothetical protein.
       0.523
ADZ10225.1
KEGG: mba:Mbar_A3349 flavoredoxin Flr; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding.
       0.471
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.