STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10247.1KEGG: bcv:Bcav_3919 protein of unknown function DUF1535. (207 aa)    
Predicted Functional Partners:
ADZ10248.1
PFAM: Protein of unknown function DUF2085, transmembrane; KEGG: mmg:MTBMA_c09070 hypothetical protein.
 
     0.708
ADZ09023.1
Hypothetical protein; KEGG: dae:Dtox_3122 tetratricopeptide TPR_2 repeat protein.
  
     0.614
ADZ09458.1
KEGG: tva:TVAG_021770 hypothetical protein.
  
     0.556
ADZ10378.1
KEGG: cyj:Cyan7822_6458 hypothetical protein.
  
     0.518
ADZ09682.1
GAF domain protein; KEGG: mpi:Mpet_0436 putative GAF sensor protein; PFAM: GAF; SMART: GAF.
  
     0.490
ADZ10379.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: mac:MA2582 hypothetical protein.
  
     0.488
ADZ09629.1
KEGG: mmg:MTBMA_c08760 hypothetical protein.
  
     0.472
ADZ10687.1
PKD domain containing protein; KEGG: mpl:Mpal_1810 carbohydrate binding family 6; PFAM: PKD domain; SMART: PKD/Chitinase domain.
  
     0.463
ADZ09611.1
KEGG: hut:Huta_2502 hypothetical protein.
  
     0.453
ADZ09922.1
PFAM: Protein of unknown function DUF457, transmembrane; KEGG: cni:Calni_0952 membrane-bound metal-dependent hydrolase.
  
     0.453
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.