STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10259.1PFAM: Domain of unknown function DUF59; KEGG: mmg:MTBMA_c02430 hypothetical protein. (96 aa)    
Predicted Functional Partners:
ADZ10260.1
KEGG: mfv:Mfer_0091 adenylate kinase.
 
     0.894
ADZ09473.1
KEGG: msi:Msm_0263 nitrogen fixation protein, NifU; TIGRFAM: NIF system FeS cluster assembly, NifU-like; PFAM: NIF system FeS cluster assembly, NifU, N-terminal.
  
    0.680
ADZ10258.1
PUA domain containing protein; KEGG: mst:Msp_1063 RNA-binding protein; PFAM: Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase.
       0.678
ADZ08354.1
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family.
 
     0.569
ADZ08619.1
KEGG: mth:MTH1149 ABC transporter subunit Ycf16; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
  
 0.519
ADZ10454.1
Protein of unknown function DUF129; PFAM: F420-0 gamma-glutamyl ligase-related; KEGG: mth:MTH1670 hypothetical protein.
 
     0.481
ADZ08523.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; KEGG: mmg:MTBMA_c16280 energy-converting hydrogenase B, subunit L.
 
     0.440
ADZ08565.1
KEGG: mfv:Mfer_1224 radical sam domain protein; PFAM: Radical SAM; Biotin/thiamin synthesis-associated protein; SMART: Elongator protein 3/MiaB/NifB.
  
  
 0.430
ADZ08526.1
KEGG: mth:MTH1237 NADH dehydrogenase (ubiquinone), subunit 1 related protein.
  
   
 0.424
ADZ08626.1
Protein of unknown function DUF795; PFAM: Uncharacterised protein family UPF0348; KEGG: mmg:MTBMA_c15090 nucleotidyltransferase.
  
     0.423
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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