Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ10302.1TIGRFAM: UDP-glucose 4-epimerase; KEGG: mth:MTH631 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase. (325 aa)    
Predicted Functional Partners:
ADZ09152.1
TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: mst:Msp_0210 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal.
  
 0.939
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 0.929
rps9
KEGG: mth:MTH39 ribosomal protein S16; TIGRFAM: Ribosomal protein S9, archaeal; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.929
ADZ10303.1
TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: mmg:MTBMA_c10160 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
  
 
 0.919
ADZ09115.1
KEGG: mba:Mbar_A0021 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase.
  
  
 
0.906
ADZ09535.1
KEGG: mba:Mbar_A0021 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase.
  
  
 
0.905
ADZ09168.1
TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: mth:MTH1791 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase.
  
 0.885
ADZ10507.1
Glucosamine-1-phosphate N-acetyltransferase; KEGG: mth:MTH1589 glucose-1-phosphate thymidylyltransferase-like protein; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat.
  
 0.885
rps3ae
KEGG: mmg:MTBMA_c01790 30S ribosomal protein S3Ae; HAMAP: 30S ribosomal protein S3Ae; PFAM: Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.850
rps19p
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
  
 0.849
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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