STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10305.1UPF0235 protein yggU; TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP: Protein of unknown function DUF167; KEGG: mmg:MTBMA_c10190 hypothetical protein; PFAM: Protein of unknown function DUF167; Belongs to the UPF0235 family. (100 aa)    
Predicted Functional Partners:
ADZ08937.1
PFAM: Uncharacterised conserved protein UCP006557, signal transduction; KEGG: mfv:Mfer_1093 hypothetical protein.
  
     0.641
ADZ10348.1
Methanogen marker protein 4; TIGRFAM: Methyltransferase Mtx, subunit X; KEGG: mfv:Mfer_0594 methanogen marker protein 4.
  
     0.589
ADZ10544.1
HAMAP: Uncharacterised protein family UPF0292; PFAM: Toprim domain; KEGG: mth:MTH890 hypothetical protein; SMART: Toprim domain.
 
     0.572
sepS
O-phosphoseryl-tRNA(Cys) synthetase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
 
     0.564
ADZ10408.1
TIGRFAM: Riboflavin synthase, archaeal; KEGG: mst:Msp_1239 riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase.
 
     0.527
ADZ08602.1
KEGG: mth:MTH1167 methyl coenzyme M reductase I, D protein; TIGRFAM: Methyl-coenzyme M reductase, protein D; PFAM: Methyl-coenzyme M reductase, protein D.
  
     0.501
ADZ10566.1
PFAM: Uncharacterised conserved protein UCP004962; KEGG: mth:MTH862 hypothetical protein.
  
     0.499
ADZ08394.1
PFAM: Protein of unknown function DUF166; KEGG: mth:MTH1356 hypothetical protein.
  
     0.491
ADZ10306.1
KEGG: pjd:Pjdr2_6008 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
       0.486
ADZ10082.1
PFAM: Protein of unknown function DUF166; KEGG: mth:MTH1356 hypothetical protein.
  
     0.483
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.