STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10314.1Regulatory protein MarR; KEGG: bcy:Bcer98_2823 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR. (171 aa)    
Predicted Functional Partners:
ADZ10315.1
PFAM: Major facilitator superfamily MFS-1; KEGG: mpl:Mpal_0727 major facilitator superfamily MFS_1.
     
 0.789
ADZ10313.1
CBS domain containing membrane protein; KEGG: mth:MTH644 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
  
  
 0.549
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
     
 0.532
ADZ08420.1
Regulatory protein MarR; KEGG: hor:Hore_04050 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
  
     0.506
ADZ09761.1
Transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; KEGG: mac:MA0414 hypothetical protein.
 
  
 0.417
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.