STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10318.1KEGG: mmg:MTBMA_c10270 toprim domain-containing protein; PFAM: Toprim domain; SMART: Toprim domain. (296 aa)    
Predicted Functional Partners:
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
       0.866
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
       0.733
ADZ10316.1
PFAM: Peptidase U32; KEGG: mst:Msp_1121 peptidase.
       0.653
ADZ10320.1
snRNP Sm-like protein; SMART: Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type; manually curated; HAMAP: snRNP Sm-like, putative, archaea; KEGG: mst:Msp_1175 small nuclear ribonucleoprotein; PFAM: Like-Sm ribonucleoprotein (LSM) domain; Belongs to the snRNP Sm proteins family.
       0.646
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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