STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10325.1PFAM: Thioesterase superfamily; KEGG: mmg:MTBMA_c10390 thioesterase. (139 aa)    
Predicted Functional Partners:
ADZ10324.1
Long-chain-fatty-acid--CoA ligase; KEGG: mth:MTH657 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase.
 
  
 0.803
ADZ10326.1
KEGG: mmz:MmarC7_1587 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3.
  
  
 0.707
ADZ10667.1
PFAM: 4Fe-4S binding domain; KEGG: mmq:MmarC5_0318 ketoisovalerate ferredoxin oxidoreductase, delta subunit.
 
  
 0.645
ADZ10645.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mmg:MTBMA_c14040 biopolymer transport protein.
 
  
 0.499
ilvD
PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: mmg:MTBMA_c00370 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.497
ADZ08530.1
Long-chain-fatty-acid--CoA ligase; KEGG: shi:Shel_23800 AMP-forming long-chain acyl-CoA synthetase; PFAM: Male sterility, NAD-binding; AMP-dependent synthetase/ligase.
 
  
 0.496
ADZ10685.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mmg:MTBMA_c10530 transporter protein.
 
  
 0.493
ADZ09915.1
KEGG: mmg:MTBMA_c10530 transporter protein.
 
  
 0.488
ADZ10706.1
KEGG: mru:mru_0329 MotA/TolQ/ExbB proton channel family protein.
 
  
 0.487
ADZ09639.1
KEGG: mba:Mbar_A1645 phenylacetic acid degradation protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
   
 0.466
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.