STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10326.1KEGG: mmz:MmarC7_1587 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3. (190 aa)    
Predicted Functional Partners:
ADZ10324.1
Long-chain-fatty-acid--CoA ligase; KEGG: mth:MTH657 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase.
 
  
 0.789
ADZ10325.1
PFAM: Thioesterase superfamily; KEGG: mmg:MTBMA_c10390 thioesterase.
  
  
 0.707
ADZ10667.1
PFAM: 4Fe-4S binding domain; KEGG: mmq:MmarC5_0318 ketoisovalerate ferredoxin oxidoreductase, delta subunit.
 
 
 0.639
ADZ10327.1
KEGG: mmg:MTBMA_c10410 hypothetical protein.
       0.472
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.463
ADZ10668.1
Butyrate--CoA ligase; KEGG: mba:Mbar_A2172 AMP-binding protein; PFAM: AMP-dependent synthetase/ligase.
 
 
 0.452
ADZ10329.1
(S)-2-hydroxy-acid oxidase; KEGG: dat:HRM2_41110 FMN-dependent dehydrogenase family protein (TIM barrel family protein); PFAM: Rubredoxin-type Fe(Cys)4 protein; FMN-dependent dehydrogenase.
 
  
 0.451
ADZ10736.1
PFAM: HTH transcriptional regulator, LysR; KEGG: mru:mru_0249 transcriptional regulator LysR family.
 
  
 0.415
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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