STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10365.1PFAM: Protein of unknown function DUF1802; KEGG: mth:MTH1210 mrr restriction system related protein. (170 aa)    
Predicted Functional Partners:
ADZ10458.1
TIGRFAM: Phosphosulpholactate synthase; KEGG: mth:MTH1674 hypothetical protein; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA.
  
    0.864
ADZ09698.1
Transcriptional regulator, TrmB; PFAM: Transcription regulator TrmB, N-terminal; KEGG: mmg:MTBMA_c00400 transcriptional regulator.
  
    0.743
ADZ10360.1
Transcriptional regulator, TrmB; KEGG: mth:MTH1454 hypothetical protein; manually curated; PFAM: Transcription regulator TrmB, N-terminal.
  
    0.737
ADZ09358.1
PFAM: DNA methylase, adenine-specific; KEGG: mmq:MmarC5_1169 N-6 DNA methylase.
  
  
 0.679
ADZ08570.1
TIGRFAM: Sulfopyruvate decarboxylase, beta subunit; KEGG: mmg:MTBMA_c15850 sulfopyruvate decarboxylase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
   
    0.653
ADZ08571.1
KEGG: msi:Msm_0080 sulfopyruvate decarboxylase, ComD; TIGRFAM: Sulfopyruvate decarboxylase, alpha subunit.
   
    0.653
ADZ09361.1
Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal; manually curated; KEGG: mmq:MmarC5_1171 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Helicase, C-terminal.
  
  
 0.651
ADZ09913.1
TIGRFAM: Parallel beta-helix repeat-2; Domain of unknown function DUF11; KEGG: msi:Msm_0282 adhesin-like protein.
  
     0.637
ADZ09783.1
KEGG: mbu:Mbur_2163 hypothetical protein.
  
  
 0.525
ADZ10368.1
Type II site-specific deoxyribonuclease; KEGG: abi:Aboo_1333 protein of unknown function DUF450; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; DNA methylase, adenine-specific.
  
  
 0.525
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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