STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10379.1Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: mac:MA2582 hypothetical protein. (416 aa)    
Predicted Functional Partners:
ADZ09922.1
PFAM: Protein of unknown function DUF457, transmembrane; KEGG: cni:Calni_0952 membrane-bound metal-dependent hydrolase.
  
     0.653
ADZ09023.1
Hypothetical protein; KEGG: dae:Dtox_3122 tetratricopeptide TPR_2 repeat protein.
  
     0.599
ADZ10378.1
KEGG: cyj:Cyan7822_6458 hypothetical protein.
 
     0.577
ADZ09458.1
KEGG: tva:TVAG_021770 hypothetical protein.
  
     0.545
ADZ08536.1
KEGG: rfr:Rfer_4150 hypothetical protein.
  
     0.533
ADZ09323.1
Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; KEGG: mst:Msp_0590 asn/thr-rich large protein family protein.
  
     0.522
ADZ08539.1
KEGG: msi:Msm_1059 RecB family exonuclease.
 
   
 0.521
ADZ09788.1
PFAM: DNA helicase, UvrD/REP type; KEGG: mru:mru_1111 ATP-dependent DNA helicase UvrD/REP family.
 
   
 0.508
ADZ10501.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mmg:MTBMA_c01800 FeMo cofactor biosynthesis protein.
  
     0.508
ADZ09842.1
Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; Parallel beta-helix repeat-2; PFAM: Domain of unknown function DUF11; Polymorphic membrane protein, Chlamydia; KEGG: abi:Aboo_0648 fibronectin type III domain protein; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat.
  
   
 0.505
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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