STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10381.1KEGG: afu:AF1469 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (218 aa)    
Predicted Functional Partners:
ADZ10380.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: clj:CLJU_c15500 putative ABC transporter permease.
 
 
 0.970
ADZ09496.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mru:mru_1702 ABC transporter permease protein.
 
 0.906
ADZ09815.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: rci:RCIX2314 ABC-type transport system, permease component.
 
 0.898
ADZ10022.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mmg:MTBMA_c10830 ABC-type transport system, permease protein.
 
 0.897
ADZ10046.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mru:mru_1702 ABC transporter permease protein.
 
 0.893
ADZ09746.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mmg:MTBMA_c10830 ABC-type transport system, permease protein.
 
 0.892
ADZ09721.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: mth:MTH695 hypothetical protein.
 
 
 0.860
rpl2
Ribosomal protein L2, C-terminal; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
   
 0.575
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily.
  
 0.526
ADZ10659.1
KEGG: mmg:MTBMA_c10960 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.518
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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