Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADZ10387.1KEGG: mth:MTH209 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, CTE7; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase. (226 aa)    
Predicted Functional Partners:
ADZ10386.1
KEGG: mfv:Mfer_0221 replicative DNA polymerase I; PFAM: DNA-directed DNA polymerase, family B, conserved region.
 
     0.787
ADZ09664.1
KEGG: mth:MTH103 water channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein.
  
 
 0.729
ADZ10388.1
SMART: ATPase, AAA+ type, core; KEGG: mmg:MTBMA_c06590 ATPase.
       0.704
ADZ08367.1
KEGG: mru:mru_2213 fuculose 1-phosphate aldolase FucA; PFAM: Class II aldolase/adducin, N-terminal.
  
  
 0.668
rps8e
TIGRFAM: Ribosomal protein S8e; HAMAP: Ribosomal protein S8e, archaeal; KEGG: mth:MTH207 30S ribosomal protein S8e; PFAM: Ribosomal protein S8e/ribosomal biogenesis NSA2.
  
    0.601
ADZ08527.1
PFAM: Energy-converting hydrogenase B, subunit P; KEGG: msi:Msm_1061 energy-converting hydrogenase B, subunit P, EhbP.
       0.537
ADZ10207.1
PFAM: NUDIX hydrolase domain; KEGG: mmg:MTBMA_c05710 hydrolase.
  
 
 0.537
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
 
    0.512
ADZ08291.1
PFAM: Nucleotidyl transferase; KEGG: mmg:MTBMA_c01060 nucleotidyl transferase.
  
  
 0.510
ADZ08931.1
TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: mth:MTH1861 molybdenum cofactor biosynthesis MoaB; SMART: Molybdopterin binding.
 
   
 0.484
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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