STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10502.1Flavodoxin; KEGG: cbe:Cbei_3563 flavodoxin. (151 aa)    
Predicted Functional Partners:
ADZ10500.1
PFAM: Methyltransferase type 12; KEGG: sen:SACE_0718 TDP-desosamine-N-dimethyltransferase.
 
    0.703
ADZ10501.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mmg:MTBMA_c01800 FeMo cofactor biosynthesis protein.
     
 0.636
ADZ10499.1
PFAM: NADPH-dependent FMN reductase; KEGG: mem:Memar_0225 NADPH-dependent FMN reductase.
     
 0.572
rps3ae
KEGG: mmg:MTBMA_c01790 30S ribosomal protein S3Ae; HAMAP: 30S ribosomal protein S3Ae; PFAM: Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.499
ADZ08528.1
PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; KEGG: shi:Shel_23820 choline dehydrogenase-like flavoprotein.
 
     0.431
ADZ10504.1
KEGG: mmg:MTBMA_c01780 hypothetical protein; TIGRFAM: Protein of unknown function DUF92, TMEM19; PFAM: Protein of unknown function DUF92, TMEM19.
       0.412
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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