STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10545.1PFAM: Protein of unknown function DUF211; KEGG: mmg:MTBMA_c12840 hypothetical protein. (96 aa)    
Predicted Functional Partners:
ADZ10546.1
PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: mfv:Mfer_0465 dimethylmenaquinone methyltransferase.
 
     0.886
ADZ08877.1
KEGG: mth:MTH561 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00267; PFAM: Domain of unknown function DUF125, transmembrane.
 
     0.749
ADZ10547.1
PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: mmg:MTBMA_c12820 hypothetical protein.
       0.552
ADZ08677.1
HAMAP: HTH transcriptional regulator, cro/C1-type DNA-binding domain-containing; PFAM: Helix-turn-helix type 3; KEGG: mmg:MTBMA_c13530 transcriptional regulator; SMART: Helix-turn-helix type 3.
  
     0.476
ADZ08453.1
UPF0215 protein; Manually curated; HAMAP: Protein of unknown function DUF99; KEGG: mmg:MTBMA_c17020 hypothetical protein; PFAM: Protein of unknown function DUF99; Belongs to the UPF0215 family.
  
     0.432
ADZ10542.1
ATPase associated with various cellular activities AAA_5; KEGG: mth:MTH892 ATP-dependent protease La related protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core.
 
     0.414
ADZ10597.1
Protein of unknown function DUF88; KEGG: mmg:MTBMA_c04840 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00288; PFAM: Domain of unknown function DUF88.
  
     0.407
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.