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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10546.1PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: mfv:Mfer_0465 dimethylmenaquinone methyltransferase. (220 aa)    
Predicted Functional Partners:
ADZ10735.1
TIGRFAM: 6-phospho 3-hexuloisomerase; KEGG: mfv:Mfer_1158 3-hexulose-6-phosphate isomerase; PFAM: Sugar isomerase (SIS).
 
  
  0.918
ADZ08868.1
TIGRFAM: 6-phospho 3-hexuloisomerase; KEGG: mmg:MTBMA_c06990 3-hexulose-6-phosphate isomerase; PFAM: Sugar isomerase (SIS).
    
  0.907
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 
  0.905
fae-hps
Bifunctional enzyme fae/hps; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family.
     
 0.901
ADZ10545.1
PFAM: Protein of unknown function DUF211; KEGG: mmg:MTBMA_c12840 hypothetical protein.
 
     0.886
flpA
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
   
 
 0.760
ADZ10419.1
KEGG: mst:Msp_1228 helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Belongs to the DEAD box helicase family.
   
 
 0.760
ADZ08750.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal; NADP oxidoreductase, coenzyme F420-dependent; KEGG: mmg:MTBMA_c03230 dehydrogenase.
 
   
 0.607
ADZ09975.1
Nitrite reductase (NAD(P)H); KEGG: mba:Mbar_A3664 hypothetical protein; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like.
 
  
 0.577
ADZ10547.1
PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: mmg:MTBMA_c12820 hypothetical protein.
     
 0.565
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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