STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10547.1PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: mmg:MTBMA_c12820 hypothetical protein. (353 aa)    
Predicted Functional Partners:
ADZ08973.1
PFAM: Methyltransferase type 11; KEGG: npu:Npun_F4534 methyltransferase type 11.
 
  
 0.627
ADZ10546.1
PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: mfv:Mfer_0465 dimethylmenaquinone methyltransferase.
     
 0.565
ADZ10545.1
PFAM: Protein of unknown function DUF211; KEGG: mmg:MTBMA_c12840 hypothetical protein.
       0.552
ADZ08320.1
PFAM: Protein of unknown function DUF63; KEGG: mth:MTH1480 hypothetical protein.
  
     0.521
ADZ10548.1
KEGG: mth:MTH886 H/ACA RNA-protein complex component Gar1.
       0.497
tfb-2
Transcription initiation factor IIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
       0.497
ADZ08539.1
KEGG: msi:Msm_1059 RecB family exonuclease.
 
     0.494
ADZ09258.1
TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: mfv:Mfer_1038 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.
 
    0.489
ADZ08514.1
KEGG: mmg:MTBMA_c16360 energy-converting hydrogenase B, subunit D.
 
     0.478
ADZ08526.1
KEGG: mth:MTH1237 NADH dehydrogenase (ubiquinone), subunit 1 related protein.
 
     0.466
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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