STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10565.1PFAM: Protein of unknown function DUF447; KEGG: mfv:Mfer_1266 hypothetical protein. (205 aa)    
Predicted Functional Partners:
ADZ09877.1
CoA-binding domain protein; KEGG: mbu:Mbur_1347 acyl-CoA synthetase; PFAM: CoA-binding; SMART: CoA-binding.
       0.877
ADZ10566.1
PFAM: Uncharacterised conserved protein UCP004962; KEGG: mth:MTH862 hypothetical protein.
 
     0.855
ADZ10274.1
KEGG: mmg:MTBMA_c02300 MurG-related protein.
  
     0.609
ADZ08402.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c17580 ABC transporter, permease component.
  
     0.605
ADZ08419.1
Replication factor-A domain protein; PFAM: Replication factor A, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmg:MTBMA_c17710 replication factor A.
  
     0.568
ADZ10574.1
KEGG: mfv:Mfer_0512 hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.567
ADZ10048.1
PFAM: Peptidase C60, sortase A/B; KEGG: mmg:MTBMA_c03990 sortase related protein.
  
     0.558
rnp2
Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
 
     0.542
ADZ10698.1
PFAM: Domain of unknown function DUF128; Ribonuclease R winged-helix domain; KEGG: mmg:MTBMA_c01560 transcriptional repressor of nif & GlnA operons NrpR.
  
     0.542
ADZ08743.1
KEGG: mth:MTH1741 hypothetical protein; TIGRFAM: Dihydropteroate synthase-related protein synthase-related protein; PFAM: Pterin-binding.
 
   
 0.539
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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