STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10682.1Methanogenesis marker protein 8; KEGG: rci:LRC199 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP004929, methanogenesis; PFAM: Uncharacterised conserved protein UCP004929, methanogenesis. (276 aa)    
Predicted Functional Partners:
ADZ08601.1
TIGRFAM: Methyl-coenzyme M reductase, beta subunit; KEGG: mmg:MTBMA_c15520 methyl-coenzyme M reductase I, subunit beta; PFAM: Methyl-coenzyme M reductase, beta subunit, C-terminal; Methyl-coenzyme M reductase, beta subunit, N-terminal.
 
     0.761
ADZ08605.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.760
ADZ10492.1
TIGRFAM: Methyl-coenzyme M reductase, beta subunit; KEGG: mfv:Mfer_0731 methyl-coenzyme m reductase, beta subunit; PFAM: Methyl-coenzyme M reductase, beta subunit, C-terminal; Methyl-coenzyme M reductase, beta subunit, N-terminal.
 
     0.759
ADZ10495.1
Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
 
     0.758
ADZ08598.1
Methanogenesis marker protein 7; TIGRFAM: Uncharacterised conserved protein UCP019164, methanogenesis; KEGG: mmg:MTBMA_c15570 methyl coenzyme M reductase II, operon protein C.
 
     0.757
ADZ08604.1
TIGRFAM: Methyl-coenzyme M reductase, gamma subunit; KEGG: mth:MTH1165 methyl coenzyme M reductase I, gamma subunit; PFAM: Methyl-coenzyme M reductase, gamma subunit.
 
     0.754
ADZ08938.1
Methanogenesis marker protein 5; KEGG: mth:MTH1868 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP018781, methanogenesis; PFAM: Uncharacterised conserved protein UCP018781, methanogenesis.
  
     0.753
ADZ10494.1
TIGRFAM: Methyl-coenzyme M reductase, gamma subunit; KEGG: mth:MTH1130 methyl coenzyme M reductase II, gamma subunit; PFAM: Methyl-coenzyme M reductase, gamma subunit.
 
     0.751
ADZ08603.1
KEGG: mmg:MTBMA_c15500 methyl-coenzyme M reductase I, subunit epsilon; TIGRFAM: Methyl-coenzyme M reductase, protein C; PFAM: Methyl-coenzyme M reductase, protein C.
  
     0.749
ADZ08940.1
Methanogenesis marker protein 17; KEGG: mth:MTH1870 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP019464, methanogenesis; PFAM: Uncharacterised conserved protein UCP019464, methanogenesis.
 
     0.748
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.