STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10683.1KEGG: mpd:MCP_0447 hypothetical protein. (232 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp).
  
    0.642
ADZ10685.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mmg:MTBMA_c10530 transporter protein.
  
    0.629
ADZ10684.1
PFAM: Protein of unknown function DUF2149; KEGG: mmg:MTBMA_c10520 hypothetical protein.
       0.603
ADZ10687.1
PKD domain containing protein; KEGG: mpl:Mpal_1810 carbohydrate binding family 6; PFAM: PKD domain; SMART: PKD/Chitinase domain.
 
     0.498
ADZ10220.1
PFAM: UbiA prenyltransferase; KEGG: mem:Memar_2408 UbiA prenyltransferase.
 
     0.413
ADZ10686.1
Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; KEGG: dmo:Dmoj_GI17948 GI17948 gene product from transcript GI17948-RA.
       0.406
ADZ09094.1
PFAM: Domain of unknown function DUF1616; KEGG: mev:Metev_2319 hypothetical protein.
  
    0.400
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.