STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10684.1PFAM: Protein of unknown function DUF2149; KEGG: mmg:MTBMA_c10520 hypothetical protein. (104 aa)    
Predicted Functional Partners:
ADZ10685.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mmg:MTBMA_c10530 transporter protein.
 
  
 0.956
ADZ09915.1
KEGG: mmg:MTBMA_c10530 transporter protein.
 
  
 0.799
ADZ10706.1
KEGG: mru:mru_0329 MotA/TolQ/ExbB proton channel family protein.
 
  
 0.799
ADZ10683.1
KEGG: mpd:MCP_0447 hypothetical protein.
       0.603
ADZ10686.1
Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; KEGG: dmo:Dmoj_GI17948 GI17948 gene product from transcript GI17948-RA.
       0.520
mptA
Protein of unknown function DUF198; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
   
    0.499
ADZ10687.1
PKD domain containing protein; KEGG: mpl:Mpal_1810 carbohydrate binding family 6; PFAM: PKD domain; SMART: PKD/Chitinase domain.
 
     0.469
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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