STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ10703.1ABC-type transporter, periplasmic subunit; PFAM: Periplasmic binding protein; KEGG: mru:mru_0251 ABC transporter substrate-binding protein. (368 aa)    
Predicted Functional Partners:
ADZ10702.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: msi:Msm_1394 iron(III) ABC transporter, permease component.
 
     0.905
ADZ10701.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter-like; KEGG: msi:Msm_1395 iron(III) ABC transporter, ATPase component; SMART: ATPase, AAA+ type, core.
 
     0.898
ADZ10704.1
PFAM: Methyltransferase type 11; KEGG: msi:Msm_1448 SAM-dependent methyltransferase.
 
     0.817
ADZ10705.1
PFAM: Protein of unknown function DUF2149; KEGG: mru:mru_0330 hypothetical protein.
 
     0.724
ADZ10706.1
KEGG: mru:mru_0329 MotA/TolQ/ExbB proton channel family protein.
       0.677
ADZ10700.1
PFAM: Formylmethanofuran dehydrogenase, subunit E domain; KEGG: msi:Msm_1396 tungsten formylmethanofuran dehydrogenase, subunit E, FwdE.
 
     0.655
ADZ10707.1
KEGG: mru:mru_2046 hypothetical protein.
       0.497
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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